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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6070635_6071163_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6070635 - 6071163

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGGCTG

5'SS Class:

major

3'SS Sequence:

GTACTCTCTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GTTTTCGTACTC

Flanking Amino Acid:

CMKPNDAKQADRFDEVLIRH

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

58.7

45.5

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.32

1.1

60.8

40.3

Minor 5ss

40.6

-1.1

3.3

52.4

45.8

Minor BPS

48.6

-0.1

2.2

40.4

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027147

6061088 - 6092694

31607

ENSAPLT00000008084

6062499 - 6092694

30196

ENSAPLT00000043899

6061088 - 6117297

56210