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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6071270_6071457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6071270 - 6071457

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCATACATGATT

Flanking Amino Acid:

ELTDKKRPETAATQFKNSLS

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

79.1

36.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

83.1

0.74

0.7

77.1

31.6

Minor 5ss

36.3

-1.5

3.3

49.4

46.6

Minor BPS

49.9

0.07

1.8

69.77

41.2

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043899

6061088 - 6117297

56210

ENSAPLT00000027147

6061088 - 6092694

31607

ENSAPLT00000008084

6062499 - 6092694

30196