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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6072181_6073387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6072181 - 6073387

Intron Length:

1207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

ACTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

AGTTTCTTCACT

Flanking Amino Acid:

ETVKNHPHFLTHKLADQKTR

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.2

81.3

32.8

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

85.3

0.79

0.8

77.5

36.3

Minor 5ss

34.6

-1.8

3.4

48.3

41.3

Minor BPS

67.6

0.64

1.7

82.73

38.4

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027147

6061088 - 6092694

31607

ENSAPLT00000008084

6062499 - 6092694

30196

ENSAPLT00000043899

6061088 - 6117297

56210