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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6077043_6077241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6077043 - 6077241

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTGTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATCA

Flanking Amino Acid:

NPQQYHYLVKGHCARVSSIN

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

88.7

25.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.8

0.54

0.9

70.5

39.6

Minor 5ss

42.3

-0.8

2.8

59.2

45.4

Minor BPS

66.1

0.5

1.5

75.42

36.1

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008084

6062499 - 6092694

30196

ENSAPLT00000043899

6061088 - 6117297

56210

ENSAPLT00000027147

6061088 - 6092694

31607