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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6079397_6082815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6079397 - 6082815

Intron Length:

3419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CGTTGTGCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAGAAACAAACT

Flanking Amino Acid:

GVSFYEVSPHLYAIADNSYR

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

39.4

Major BPS

77.9

0.69

0.8

75.9

Major PPT

67.9

0.4

60.5

40.4

Minor 5ss

30.5

-2.2

3.2

44.4

43.5

Minor BPS

38.9

-0.7

2.2

57.31

44.3

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043899

6061088 - 6117297

56210

ENSAPLT00000027147

6061088 - 6092694

31607

ENSAPLT00000008084

6062499 - 6092694

30196