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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6082932_6083518_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6082932 - 6083518

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CCTTATGTAACC

Flanking Amino Acid:

RKRFKENLIYTYIGSVLVSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

93.1

0.97

0.6

91.8

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

48.6

-0.1

2.2

62.36

43.6

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043899

6061088 - 6117297

56210

ENSAPLT00000027147

6061088 - 6092694

31607

ENSAPLT00000008084

6062499 - 6092694

30196