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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6083675_6092676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6083675 - 6092676

Intron Length:

9002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGAAAA

U12 Branch Point Sequence:

ACGTCCCAACCT

Flanking Amino Acid:

MKFRGAGAGSNGVRLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

45.2

-0.3

1.1

46.6

Major PPT

82.1

0.72

0.9

76.3

37.7

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

44.5

-0.3

2.2

62.47

47.4

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027147

6061088 - 6092694

31607