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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6143457_6146056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6143457 - 6146056

Intron Length:

2600

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGCGGCAA

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTGTATGATT

Flanking Amino Acid:

PCSRPVTGPEGLHLVTWNVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.3

1.2

47.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

81.9

0.72

0.8

77.2

37.1

Minor 5ss

12.8

-4.3

3.4

11.1

28.3

Minor BPS

52.2

0.15

79.45

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041009

6143345 - 6146202

2858