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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6153805_6155190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6153805 - 6155190

Intron Length:

1386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTAG

5'SS Class:

major

3'SS Sequence:

GCCTATCCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATGTATTTAATC

Flanking Amino Acid:

IADRTQVLPKDYKAEEDPAK

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.6

41.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

60.4

0.24

0.9

54.9

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

64.3

0.43

1.4

69.39

36.4

Associated Gene:

Gene:

PITPNA

Ensembl Gene ID:

ENSAPLG00000008884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030091

6150233 - 6161558

11326

ENSAPLT00000009273

6150233 - 6162460

12228