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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6155275_6155642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6155275 - 6155642

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TGTACTTTCACT

Flanking Amino Acid:

HKSDLGTQENVHKLEPDVWK

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

77.7

0.62

0.9

71.1

33.8

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

63.7

0.51

1.8

81.36

40.2

Associated Gene:

Gene:

PITPNA

Ensembl Gene ID:

ENSAPLG00000008884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030091

6150233 - 6161558

11326

ENSAPLT00000009273

6150233 - 6162460

12228