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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6160552_6161121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6160552 - 6161121

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCAAATTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATCAATA

Flanking Amino Acid:

QYTHKIYHLQSKVPTFVRML

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.43

61.5

39.4

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

59.7

0.3

1.8

72.85

39.3

Associated Gene:

Gene:

PITPNA

Ensembl Gene ID:

ENSAPLG00000008884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009273

6150233 - 6162460

12228

ENSAPLT00000030091

6150233 - 6161558

11326