Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_6184464_6185317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6184464 - 6185317

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

TCGCACCTGACA

Flanking Amino Acid:

TCLIPNLPLQILSFILHTIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

76.5

34.3

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

88.1

0.86

0.7

80.4

31.6

Minor 5ss

-2.4

2.7

33.7

41.6

Minor BPS

46.9

-0.2

1.9

57.83

41.4

Associated Gene:

Gene:

SLC43A2

Ensembl Gene ID:

ENSAPLG00000009653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010086

6180703 - 6185939

5237