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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6217483_6217810_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6217483 - 6217810

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GGTCTGGGCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

AGCTGCTCACGG

Flanking Amino Acid:

GQLAESQSQEDSTARKEREV

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

56.6

0.15

1.1

49.4

43.8

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

-1.1

2.2

38.15

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025837

6217121 - 6219814

2694