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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6221125_6221207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6221125 - 6221207

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

CTCCTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CACCCTGTAACA

Flanking Amino Acid:

TFSSKTEWRVRAISAANLHL

Intron Amino Acid Position:

1982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

62.2

0.3

1.2

38.7

Major PPT

80.3

0.68

0.7

74.9

27.2

Minor 5ss

30.3

-2.3

3.3

39.2

46.3

Minor BPS

48.2

-0.1

57.29

42.4

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730