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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6223863_6224446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6223863 - 6224446

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

ATAGCAACAACT

Flanking Amino Acid:

IAIDLAYNLHSAYGNWFPGS

Intron Amino Acid Position:

1619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

93.8

0.98

0.5

92.8

16.7

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

44.9

-0.3

2.1

66.35

43.4

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730