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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6225425_6225647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6225425 - 6225647

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

TCACCTTTGACT

Flanking Amino Acid:

HESIVMDLCQVFDQELDALE

Intron Amino Acid Position:

1502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

74.1

0.6

66.7

39.9

Major PPT

76.4

0.59

0.8

68.5

37.4

Minor 5ss

35.7

-1.6

48.8

Minor BPS

68.5

0.66

1.2

77.23

39.4

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730