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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6227630_6227820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6227630 - 6227820

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

TTGCTCCCACCT

Flanking Amino Acid:

GHVLIPQSDLRWSKQTDVGI

Intron Amino Acid Position:

1247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

83.9

30.3

Major BPS

63.6

0.34

65.3

32.1

Major PPT

77.8

0.63

0.9

69.1

37.1

Minor 5ss

36.5

-1.5

2.9

49.7

46.6

Minor BPS

44.2

-0.3

2.1

66.04

44.4

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730