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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6228798_6229052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6228798 - 6229052

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

CTGGCCTCACTG

Flanking Amino Acid:

RMRLMKHDVNLGRAVFWDIK

Intron Amino Acid Position:

1055

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.2

37.5

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

38.2

-1.3

3.4

60.6

43.7

Minor BPS

44.4

-0.5

46.61

46.9

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730