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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6230892_6231014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6230892 - 6231014

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TCAGCTTTACCT

Flanking Amino Acid:

HLLTQRAFKEVGIEFMDLYS

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

34.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

88.5

0.87

0.6

88.4

21.3

Minor 5ss

40.9

-1

3.4

58.3

46.6

Minor BPS

57.3

0.31

1.8

71.91

45.4

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730