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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6233018_6233339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6233018 - 6233339

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TTATCTCTGACC

Flanking Amino Acid:

YRLGNVDAFQLADGLQYIFA

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

79.2

0.66

0.9

75.9

Minor 5ss

46.1

-0.4

3.2

63.6

48.1

Minor BPS

63.5

0.41

1.6

75.34

34.9

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730