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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6233964_6234033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6233964 - 6234033

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

CTGATGTTAGTC

Flanking Amino Acid:

KHRPPKAQKKRYLFRSFKAT

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

76.6

0.6

0.7

68.6

31.8

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

42.3

-0.6

2.1

49.77

41.6

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730