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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6234538_6235218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6234538 - 6235218

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TTTTCTGTATTT

Flanking Amino Acid:

NPISHRHSVKSQEPLPDDDE

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

83.8

0.76

0.8

81.4

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

56.4

0.28

2.2

83.14

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730