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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6236686_6236785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6236686 - 6236785

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

AAAGCGGCAGCT

Flanking Amino Acid:

VIEPVYIAQWGSMWIMMRRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

72.1

0.5

1.1

65.9

45.3

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

32.5

-1.2

2.5

48.62

Associated Gene:

Gene:

PRPF8

Ensembl Gene ID:

ENSAPLG00000010357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010838

6218603 - 6237332

18730