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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6242583_6243021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6242583 - 6243021

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAG

U12 Branch Point Sequence:

CTGCCCAGCACT

Flanking Amino Acid:

SVLSSSGALLGFYLYPGLHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

43.5

-0.4

1.7

54.7

43.1

Major PPT

0.56

0.7

24.7

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

-0.3

2.1

63.3

46.3

Associated Gene:

Gene:

TLCD2

Ensembl Gene ID:

ENSAPLG00000029842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018353

6239138 - 6248107

8970