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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6243517_6244076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6243517 - 6244076

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGATGG

5'SS Class:

major

3'SS Sequence:

CTTCCTGAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TCTTCCTGAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

54.7

45.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

67.3

0.39

66.6

38.4

Minor 5ss

36.4

-1.5

3.3

47.2

48.2

Minor BPS

74.7

0.76

1.4

79.19

36.3

Associated Gene:

Gene:

TLCD2

Ensembl Gene ID:

ENSAPLG00000029842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018353

6239138 - 6248107

8970