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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6250820_6251496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6250820 - 6251496

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACGTGT

5'SS Class:

major

3'SS Sequence:

TTTATCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTTCTTTTATC

Flanking Amino Acid:

PSLDCLPCFKVTVEQGKVFV

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

66.5

41.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.1

0.79

0.7

82.2

29.6

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

66.4

0.5

1.6

73.85

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011520

6250180 - 6257663

7484