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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6251704_6251839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6251704 - 6251839

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GCATCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TGATGTGTAATA

Flanking Amino Acid:

NPNTVLLLGGGVAALVCAET

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

71.9

0.49

0.9

65.9

35.7

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

46.1

-0.3

2.3

60.25

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011520

6250180 - 6257663

7484