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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6251953_6252377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6251953 - 6252377

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTCTG

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

TGTGTCATATTT

Flanking Amino Acid:

APYDKSKLIKEMTMKAEDLY

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

66.5

44.5

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

40.3

-1.1

2.7

50.3

Minor BPS

47.7

-0

1.9

68.9

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011520

6250180 - 6257663

7484