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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6252465_6252821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6252465 - 6252821

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCAAGAG

5'SS Class:

major

3'SS Sequence:

CTTTGTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CCTTCCTGATCT

Flanking Amino Acid:

RDIELWTEKEAVSVDFQKQK

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

55.6

37.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

0.81

0.8

80.7

31.4

Minor 5ss

22.6

-3.2

3.3

28.5

43.8

Minor BPS

60.6

0.41

1.8

76.58

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011520

6250180 - 6257663

7484