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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6252914_6253141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6252914 - 6253141

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTCTCTCTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

CATACCTGGATT

Flanking Amino Acid:

YNQLLIATGSHSSSLKVPGA

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

77.2

32.8

Major BPS

84.6

0.86

41.2

Major PPT

85.6

0.8

0.7

84.3

23.5

Minor 5ss

36.1

-1.6

2.9

47.9

41.8

Minor BPS

55.5

0.25

1.6

69.48

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011520

6250180 - 6257663

7484