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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6254855_6255308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6254855 - 6255308

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

CTTTGCTGCATT

Flanking Amino Acid:

IPADVVVLGIGALPSSEFLK

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

81.4

32.7

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

83.1

0.74

0.7

77.2

24.8

Minor 5ss

39.7

-1.2

2.9

51.2

45.7

Minor BPS

47.4

-0.1

2.3

72.16

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011520

6250180 - 6257663

7484