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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6286459_6286653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6286459 - 6286653

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGGAA

U12 Branch Point Sequence:

TCCTATGGAATT

Flanking Amino Acid:

SLASRVYLQKGLEVKEKFLE

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

54.5

0.11

1.4

55.4

Major PPT

67.7

0.4

0.9

61.8

34.9

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

43.4

-0.4

2.1

60.83

43.7

Associated Gene:

Gene:

SERPINF2

Ensembl Gene ID:

ENSAPLG00000011351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018391

6283295 - 6290475

7181

ENSAPLT00000011813

6285188 - 6290475

5288

ENSAPLT00000041842

6282711 - 6290475

7765