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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6301111_6301939_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

6301111 - 6301939

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAACG

5'SS Class:

strong_major

3'SS Sequence:

AAAAAAAAAACAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATCTTTAAAA

Flanking Amino Acid:

ILLAGAAYFKGTWGTKFDTK

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

41.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

46.2

-0.2

1.1

31.3

38.7

Minor 5ss

33.4

-1.9

2.8

33.9

Minor BPS

76.9

0.84

1.2

81.67

32.9

Associated Gene:

Gene:

SERPINF1

Ensembl Gene ID:

ENSAPLG00000011440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029563

6298886 - 6303701

4816

ENSAPLT00000011959

6296684 - 6303701

7018