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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6319678_6320884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6319678 - 6320884

Intron Length:

1207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGACTG

5'SS Class:

major

3'SS Sequence:

TTTGTGGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCCAA

U12 Branch Point Sequence:

CTATCCAAAAAT

Flanking Amino Acid:

DTPEAFKLRGWFDSEGQLLE

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

60.8

43.6

Major BPS

60.3

0.26

1.2

70.7

35.5

Major PPT

78.4

0.64

69.2

46.1

Minor 5ss

41.8

-0.9

3.1

53.4

44.7

Minor BPS

0.01

2.1

71.17

45.1

Associated Gene:

Gene:

RPA1

Ensembl Gene ID:

ENSAPLG00000012442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034903

6311610 - 6354046

42437

ENSAPLT00000013010

6311610 - 6328311

16702