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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6323602_6326860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6323602 - 6326860

Intron Length:

3259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCAG

5'SS Class:

major

3'SS Sequence:

GTCCTTCTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCCTTCTCACAG

Flanking Amino Acid:

AAFLGELKEKNEQAFEEVFQ

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.3

68.8

43.8

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

77.6

0.62

0.8

71.7

32.9

Minor 5ss

-2.4

2.6

32.3

42.2

Minor BPS

44.4

-0.5

1.9

47.8

45.6

Associated Gene:

Gene:

RPA1

Ensembl Gene ID:

ENSAPLG00000012442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034903

6311610 - 6354046

42437

ENSAPLT00000013010

6311610 - 6328311

16702