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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6327_6580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6327 - 6580

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TCAAGTTTAACT

Flanking Amino Acid:

IWVKLSQLEEAPACIPPCGY

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.8

Major BPS

76.8

0.67

40.9

Major PPT

74.9

0.56

0.8

67.7

33.7

Minor 5ss

36.6

-1.5

3.5

50.4

46.4

Minor BPS

0.33

1.8

73.13

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020589

5055 - 8928

3874