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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6401514_6446631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6401514 - 6446631

Intron Length:

45118

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCATGGAG

5'SS Class:

major

3'SS Sequence:

CTCCTTTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTCAC

U12 Branch Point Sequence:

GAGAGGTCACTT

Flanking Amino Acid:

HTSHFLSDPKAARSTQAVPK

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

58.7

43.5

Major BPS

0.02

1.3

54.8

42.1

Major PPT

67.8

0.4

66.8

33.2

Minor 5ss

13.7

-4.2

3.5

20.2

37.7

Minor BPS

31.9

-1.2

2.3

42.43

Associated Gene:

Gene:

HIC1

Ensembl Gene ID:

ENSAPLG00000029890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019728

6398951 - 6448782

49832

ENSAPLT00000045707

6398951 - 6448955

50005