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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6514233_6514303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6514233 - 6514303

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTCGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCGCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

AGAGAGCTAATG

Flanking Amino Acid:

GRRGHIKEPLGTHGHMKCHF

Intron Amino Acid Position:

740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

63.6

48.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

64.9

0.34

0.9

57.5

38.6

Minor 5ss

32.2

-2

3.1

40.9

45.4

Minor BPS

35.7

-1.2

2.2

37.11

38.7

Associated Gene:

Gene:

TSR1

Ensembl Gene ID:

ENSAPLG00000013422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013999

6513194 - 6520302

7109