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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6514379_6514475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6514379 - 6514475

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCCT

5'SS Class:

major

3'SS Sequence:

CTTTGATCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CCTTCCTCACCT

Flanking Amino Acid:

AVVRYMFFNREDVMWFKPVE

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.2

43.9

Major BPS

0.85

0.9

39.9

Major PPT

79.5

0.66

0.9

70.2

40.4

Minor 5ss

32.3

-2

3.5

48.5

47.2

Minor BPS

58.5

0.35

1.9

75.75

46.8

Associated Gene:

Gene:

TSR1

Ensembl Gene ID:

ENSAPLG00000013422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013999

6513194 - 6520302

7109