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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6514617_6514862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6514617 - 6514862

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTGCGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAC

U12 Branch Point Sequence:

CTGGTAATGACT

Flanking Amino Acid:

SVLLFKQRSNGMQDLIATGS

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.1

42.1

Major BPS

0.42

1.1

57.7

Major PPT

69.9

0.45

0.9

62.1

34.8

Minor 5ss

34.6

-1.7

2.8

45.3

Minor BPS

43.7

-0.4

1.9

60.22

43.7

Associated Gene:

Gene:

TSR1

Ensembl Gene ID:

ENSAPLG00000013422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013999

6513194 - 6520302

7109