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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6519367_6520012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6519367 - 6520012

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

GCTCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

CACTCTTGGAGC

Flanking Amino Acid:

LQLRRQRKEAVLAEKRNLGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

58.8

40.6

Major BPS

67.8

0.44

30.1

Major PPT

73.1

0.52

0.9

65.6

36.1

Minor 5ss

24.6

-2.9

3.4

32.5

42.6

Minor BPS

45.7

-0.3

1.8

50.44

40.9

Associated Gene:

Gene:

TSR1

Ensembl Gene ID:

ENSAPLG00000013422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013999

6513194 - 6520302

7109