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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6520117_6520223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6520117 - 6520223

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTGTTCTTCCCC

Flanking Amino Acid:

HKGGKRRGAAGRVPVKVQSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

71.9

0.49

0.7

68.6

25.1

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

43.5

-0.5

3.6

69.13

Associated Gene:

Gene:

TSR1

Ensembl Gene ID:

ENSAPLG00000013422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013999

6513194 - 6520302

7109