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Intron Name: Anas_platyrhynchos_platyrhynchos_20_65379_66041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65379 - 66041

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

GCATGTTTACTG

Flanking Amino Acid:

SGNPAIFSSGIIMDSNITKQ

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.7

41.3

Major BPS

71.4

0.53

1.1

63.4

Major PPT

86.2

0.81

0.8

80.9

31.1

Minor 5ss

40.2

-1.1

2.8

45.4

42.5

Minor BPS

43.9

-0.6

43.89

42.7

Associated Gene:

Gene:

STX1A

Ensembl Gene ID:

ENSAPLG00000006044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006280

60795 - 139656

78862