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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6553512_6553738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6553512 - 6553738

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

CTACATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GGGTTTTGAATG

Flanking Amino Acid:

PNLVLKGQVDETFPDNGNII

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.7

0.65

0.9

72.6

36.9

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

-0.2

1.5

48.97

39.2

Associated Gene:

Gene:

SLC13A2

Ensembl Gene ID:

ENSAPLG00000014379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015016

6546565 - 6559855

13291