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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6555457_6556052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6555457 - 6556052

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

CCTTTCTGAATT

Flanking Amino Acid:

DTSTKDRQQAGRKPKVLAPP

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.7

33.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

74.1

0.54

0.9

71.2

38.6

Minor 5ss

44.1

-0.6

2.8

56.9

47.3

Minor BPS

65.1

0.55

1.4

75.82

41.6

Associated Gene:

Gene:

SLC13A2

Ensembl Gene ID:

ENSAPLG00000014379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015016

6546565 - 6559855

13291