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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6561181_6562623_R

Intron Information:

Intron Rank:

137729

Intron Class:

major

Intron Phase:

Intron Coordinates:

6561181 - 6562623

Intron Length:

1443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTGTT

5'SS Class:

major

3'SS Sequence:

TCTCTGTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TTATTGTTAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

77.9

36.9

Major BPS

0.42

1.3

60.1

46.3

Major PPT

82.1

0.72

0.8

75.9

32.8

Minor 5ss

40.1

-1.1

3.2

58.3

46.3

Minor BPS

51.2

0.12

2.2

76.08

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039378

6560155 - 6562909

2755

ENSAPLT00000037427

6560403 - 6562909

2507