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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6605752_6606560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6605752 - 6606560

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTCTCCCTAAAG

Flanking Amino Acid:

PLFPKPIYSYSILIFMALKN

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

71.5

0.48

71.3

27.3

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

54.2

-0

1.9

61.25

46.2

Associated Gene:

Gene:

FOXN1

Ensembl Gene ID:

ENSAPLG00000014618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015232

6595301 - 6615881

20581