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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6606658_6612492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6606658 - 6612492

Intron Length:

5835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

CATTCTTAGATT

Flanking Amino Acid:

FMTEHFPYFKTAPDGWKNSV

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

91.6

0.94

0.7

84.6

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

55.6

0.26

1.7

70.92

Associated Gene:

Gene:

FOXN1

Ensembl Gene ID:

ENSAPLG00000014618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015232

6595301 - 6615881

20581