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Intron Name: Anas_platyrhynchos_platyrhynchos_20_66116_82576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66116 - 82576

Intron Length:

16461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

ATGTTGCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAA

U12 Branch Point Sequence:

GAGCTCACAAGT

Flanking Amino Acid:

KGRIQRQLEITGRTTTSEEL

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

56.2

0.15

64.6

32.2

Major PPT

76.9

0.61

70.1

40.8

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

40.6

-0.6

1.9

52.55

41.7

Associated Gene:

Gene:

STX1A

Ensembl Gene ID:

ENSAPLG00000006044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006280

60795 - 139656

78862