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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6612701_6613230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6612701 - 6613230

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

VAVRKSMAKPEELDTLIGDK

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.2

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

85.1

0.79

0.8

79.6

32.3

Minor 5ss

32.8

-2

2.7

42.5

44.3

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

FOXN1

Ensembl Gene ID:

ENSAPLG00000014618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015232

6595301 - 6615881

20581